scAdam models

Model	Description	Suspension	Accuracy	Balanced Accuracy	Levels	Reference
Human_BMMC	Bone marrow mononuclear cell of healthy adults	cells	0.947	0.942	3	[Luecken et al., 2021]
Human_Bone_Marrow	A Balanced Bone Marrow Reference	cells	0.881	0.861	3	[Zeng et al., 2025]
Human_Brain_atlas	Human Brain Cell Atlas v1.0	nuclei	0.998	0.998	2	[Siletti et al., 2023]
Human_Brain_Dementia	Cross-dementia human brain snRNA-seq	nuclei	0.999	0.999	2	[Rexach et al., 2024]
Human_Brain_DLPFC	Seattle Alzheimer’s disease dorsolateral prefrontal cortex	nuclei	0.997	0.997	2	[Gabitto et al., 2024]
Human_Brain_MTG	Seattle Alzheimer’s disease middle temporal gyrus	nuclei	0.998	0.998	2	[Gabitto et al., 2024]
Human_Breast_cancer	Single-cell atlas of human breast cancers	cells	0.955	0.943	2	[Chen et al., 2026]
Human_CC_Dev_RNA	Multi-omic profiling of the developing human cerebral cortex (RNA)	nuclei	0.974	0.975	2	[Zhu et al., 2023]
Human_CC_Dev_ATAC	Multi-omic profiling of the developing human cerebral cortex (ATAC)	nuclei	0.916	0.912	2	[Zhu et al., 2023]
Human_Fetal	A human cell atlas of fetal gene expression	nuclei	0.984	0.981	2	[Cao et al., 2020]
Human_Heart	Human heart CITE-seq analysis of healthy and diseased states	cells	0.957	0.956	2	[Amrute et al., 2024]
Human_HNSCC	Single-cell atlas of HPV-negative Head and Neck Cancer	cells	0.980	0.981	2	[Kroehling et al., 2026]
Human_Kidney_cell	scRNA-seq of the Adult Human Kidney (V. 1.5)	cells	0.974	0.974	3	cellxgene
Human_Kidney_nucleus	snRNA-seq of the Adult Human Kidney (V. 1.5)	nuclei	0.973	0.972	3	cellxgene
Human_Lung	Core Human Lung Cell Atlas	cells	0.965	0.964	5	[Sikkema et al., 2023]
Human_Lung_Cancer	Extended single-cell lung cancer atlas	cells	0.937	0.936	3	[Salcher et al., 2022]
Human_Optic_nerve	Single nuclei atlas of the human optic nerve	nuclei	0.995	0.994	2	cellxgene
Human_oropharyngeal_SCC	Oropharyngeal HPV+/HPV- squamous cell carcinoma and normal tissue	cells	0.972	0.968	2	cellxgene
Human_Pancreas	Pancreatic islet atlas (non-diabetes, prediabetes and type 2 diabetes)	cells	0.996	0.989	1	[Bandesh et al., 2025]
Human_PBMC	Peripheral blood mononuclear cells of healthy adults	cells	0.979	0.979	3	[Hao et al., 2021]
Human_Retina_cell	Single cell atlas of the human retina	cells	0.984	0.979	4	[Li et al., 2023]
Human_Retina_nucleus	Single nucleus atlas of the human retina	nuclei	0.994	0.994	2	[Li et al., 2023]
Human_Subcutaneous_AT	Subcutaneous adipose tissue atlas	cells	0.973	0.954	3	unpublished atlas by Laletin V. and Chechekhin V.
Human_Testes	Single cell atlas of the human testes	cells	0.991	0.991	2	unpublished atlas by Chechekhin V.
Human_Visceral_AT	Visceral adipose tissue atlas	cells	0.978	0.975	3	unpublished atlas by Chechekhin V.
Mouse_Aging_Brain	Atlas of mouse aging brain	cells	0.993	0.993	1	[Zhao et al., 2020]
Mouse_BAT	Pansci brown adipose tissue atlas	nuclei	0.979	0.945	2	[Zhang et al., 2024]
Mouse_Retina	Single cell atlas of the mouse retina	cells	0.967	0.960	4	[Li et al., 2024]
Mouse_Cerebellum	Single nuclei atlas of the Mouse cerebellum	nuclei	0.999	0.999	2	[Hao et al., 2024]
Mouse_Colon	Pansci colon atlas	nuclei	0.968	0.933	2	[Zhang et al., 2024]
Mouse_Duodenum	Pansci duodenum atlas	nuclei	0.964	0.897	2	[Zhang et al., 2024]
Mouse_gWAT	Pansci perigonadal adipose tissue atlas	nuclei	0.977	0.947	2	[Zhang et al., 2024]
Mouse_Heart	Pansci heart atlas	nuclei	0.961	0.932	2	[Zhang et al., 2024]
Mouse_Hippocampus	Atlas of mouse hippocampus of health and 5xFAD mice	nuclei	0.949	0.948	2	unpublished atlas by Mareeva S. and Tychinin D.
Mouse_Ileum	Pansci ileum atlas	nuclei	0.973	0.950	2	[Zhang et al., 2024]
Mouse_iWAT	Pansci perigonadal adipose tissue atlas	nuclei	0.977	0.947	2	[Zhang et al., 2024]
Mouse_Jejunum	Pansci jejunum atlas	nuclei	0.975	0.926	2	[Zhang et al., 2024]
Mouse_Kidney	Pansci kidney atlas	nuclei	0.988	0.949	2	[Zhang et al., 2024]
Mouse_Liver	Pansci liver atlas	nuclei	0.986	0.950	2	[Zhang et al., 2024]
Mouse_Lung	Pansci lung atlas	nuclei	0.975	0.953	2	[Zhang et al., 2024]
Mouse_Muscle	Pansci muscle atlas	nuclei	0.975	0.942	2	[Zhang et al., 2024]
Mouse_Stomach	Pansci stomach atlas	nuclei	0.962	0.914	2	[Zhang et al., 2024]
Mouse_Testes	Atlas of mouse testes	cells	0.975	0.975	3	unpublished atlas by Chechekhin V.
Macaque_Cerebellum	Single nuclei atlas of the Macaque cerebellum	nuclei	0.995	0.994	2	[Hao et al., 2024]
Marmoset_Cerebellum	Single nuclei atlas of the Marmoset cerebellum	nuclei	0.988	0.987	2	[Hao et al., 2024]